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Publicaciones

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  1. Mikryukov V, Dulya O, Abarenkov K, Anslan S, Hagh-Doust N, Prins V,...  Alvarez-Manjarrez J,... Tedersoo L. 2026. Global dataset of soil eukaryotic communities created with a uniform protocol and long read sequencing. Scientific Data. https://doi.org/10.1038/s41597-026-07315-y
     

  2. Cruz Campuzano EA, Avila Muñoz M, Silva-Tostado CE, Estrada Avendaño A, Salas-Lizana R, Hernández-Navarro E, Kennedy P, Smith ME, Miller KO, Franck AR, Alvarez-Manjarrez J. 2026. Species delimitation in a cryptic Neotropical Thelephora species complex, with insights into the phylogenetic informativeness of loci. Mycologia https://doi.org/10.1080/00275514.2026.2651040
     

  3. Águila B, Alvarez-Manjarrez J, Tedersoo L, Bahram M, Escalante A, Garibay-Orijel R. 2026. Diversity and distribution of soil fungi in Neotropical Mexican forests. Biotropica https://doi.org/10.1111/btp.70190
     

  4. Hernández-Navarro E, Velázquez Machorro V,  Alvarez-Manjarrez J. 2026. Two new species of Tulostoma from the tropical dry forest of Mexico. Mycologia https://doi.org/10.1080/00275514.2025.2604592
     

  5. Alvarez-Manjarrez J, Henkel TW, Duncan A, Aime C, Peay KG, Smith ME. 2025. New species of Thelephora (Thelephorales, Basidiomycota) associated with Dicymbe and Aldina in Guyana. Mycologia https://doi.org/10.1080/00275514.2025.2472593 
     

  6. Holmes KD, Fine P, Mesones I, Alvarez-Manjarrez J, Venturini AM, Peay K, Salazar D. 2025. Evolutionary trajectories of shoots vs. roots: plant volatile metabolomes are richer, but less structurally diverse belowground in the tropical tree genus Protium. Plants 14(2), 225 https://doi.org/10.3390/plants14020225 
     

  7. Alvarez-Manjarrez J, Bahram M, Põlme S, & Garibay-Orijel R. 2024. Impact of hurricane disturbance on mycorrhizal co-occurrence networks: Resilience and community dynamics in the Neotropics. Fungal Ecology, 70, 101354. https://doi.org/10.1016/j.funeco.2024.101354
     

  8. Willing C, Pellitier P, Van Nuland ME, Chin KN, Villa LM, Yeam JJ, Alvarez-Manjarrez J, Bourque SD, Tripp W, Peay KG. 2024. A risk assessment framework for the future of forest microbiomes in a changing climate. Nature and Climate Change. https://doi.org/10.1038/s41558-024-02000-7
     

  9. Villarruel-Ordaz JL, Maldonado-Bonilla LD, Sanchez-Espinoza AC, Garibay-Orijel R, Alvarez-Manjarrez J. 2024. Thelephora pacifica (Basidiomycota: Thelephorales), a new species of the tropical forests in the Mexican Pacific coast. Phytotaxa 634 (3): 204-214. https://doi.org/10.11646/PHYTOTAXA.634.3.2
     

  10. Villarruel-Ordaz JL, Valera Venegas G, Garibay Orijel R, Alvarez-Manjarrez J, Maldonado Bonilla LD, Sánchez Espinosa AC. 2024. Efecto de la altitud, orientación y pendiente del terreno sobre la distribución de macromicetos en un bosque tropical caducifolio en la costa de Oaxaca, México. Polibotánica 57: 81-36. https://doi.org/10.18387/polibotanica.57.5
     

  11. Mikryukov V, Dulya O, Zizka A, Bahram M, Hagh-Doust N, Anslan S… Alvarez-Manjarrez J,… Tedersoo L. 2024. Connecting the multiple dimensions of global soil fungal diversity. Science Advances. https://www.science.org/doi/10.1126/sciadv.adj8016 
     

  12. Salas-Lizana R, Villegas Ríos M, Alvarez-Manjarrez J, Pérez-Pazos E, Farid A, Franck A, Smith ME, Garibay-Orijel R. 2023. Neotropical Clavulina: two new species from Mexico and a re-evaluation of Clavulina floridana. Mycologia https://doi.org/10.1080/00275514.2022.2148191
     

  13. Tedersoo, L., Mikryukov, V., Zizka, A., Bahram, M., Hagh‐Doust, N., Anslan, S., Prylutskyi, O., Delgado‐Baquerizo, M., Maestre, F. T., Pärn, J., Öpik, M., Moora, M., Zobel, M., Espenberg, M., Mander, Ü., Khalid, A. N., Corrales, A., Agan, A., Vasco‐Palacios, A., … Alvarez-Manjarrez J, … Abarenkov, K. 2022. Global patterns in endemicity and vulnerability of soil fungi. Global Change Biology. https://doi.org/10.1111/gcb.16398
     

  14. Alvarez-Manjarrez J, Garibay-Orijel R. 2021. Soil fungal diversity was resistant and resilient to Patricia hurricane landfall. Forest Ecology and Management 498. https://doi.org/10.1016/j.foreco.2021.119550.
     

  15. Alvarez-Manjarrez J, Solís-Rodríguez AU, Ortega-Larrocea MP, Villarruel-Ordaz, Garibay-Orijel R. 2021. Micorrizas y otras simbiosis rizosféricas de especies vegetales del bosque tropical caducifolio de México. Acta Botánica Mexicana 128. https://doi.org/10.21829/abm128.2021.1906
     

  16. Tedersoo L, Mikryukov V, Anslan S, Bahram M, Khalid AN, Corrales A… Alvarez-Manjarrez J,… Abarenkov K. 2021. The Global Soil Mycobiome consortium dataset for boosting fungal diversity research. Fungal diversity 111: 573–588. https://doi.org/10.1007/s13225-021-00493-7
     

  17. Villarruel-Ordaz JL, Garibay-Orijel R, Alvarez-Manjarrez J, Sánchez Espinoza AC, Machorro Sámano S, Varela Venegas G, Marín González PG. 2021. Macromicetos asociados a la selva baja caducifolia en la región costa de Oaxaca, México. Revista Mexicana de Biodiversidad 92: e923733.  https://doi.org/10.22201/ib.20078706e.2021.92.3733
     

  18. Polme S, Abarenkov K, Nilsson RH, Lindahl BD, Clemmensen KE, Kauserud H, Nguyen N, Kjoller R, Bates ST, Baldrian P, Froslev TG, Adojaan K, Vizzini A, Suija A, Pfister D, Baral H-O,… Alvarez-Manjarrez J, … Tedersoo L. 2021. Fungal traits: a user-friendly traits database of fungi and fungus-like stramenopiles. Fungal diversity. https://doi.org/10.1007/s13225-020-00466-2
     

  19. Yuan HS, Lu X, Dai YC, Hyde KD, Kan YH, Lin CG, Kušan I, Liu N, Sarma VV, He SH, Zhao CL, Cui BK, Yousaf N, Wu F, Samarakoon MC, Dayarathne MC, ... Alvarez-Manjarrez J, ...Zhou LW. 2020. Fungal diversity notes 1276–1391: taxonomic and phylogenetic contributions to fungal taxa. Fungal Diversity 103. https://doi.org/10.1007/s13225-020-00461-7
     

  20. Alvarez-Manjarrez J, Garibay-Orijel R, Smith ME. 2018. Caryophylalles are the main hosts of a unique set of ectomycorrhizal species in a Neotropical dry forest. Mycorrhiza 28: 103-115. DOI: https://doi.org/10.1007/s00572-017-0807-7
     

  21. Alvarez-Manjarrez J, Villegas-Ríos M, Garibay-Orijel R, Contreras-Pacheco M, Koljalg U. 2016. Tomentella brunneoincrustata, the first described species of the Pisonieae-associated Neotropical Tomentella clade, and phylogenetic analysis of the genus in Mexico. Mycological Progress 15: 10. https://doi.org/10.1007/s11557-015-1152-x
     

  22. Ramírez-López I, Villegas Ríos M, Salas Lizana R, Garibay Orijel R, Alvarez Manjarrez J. 2015. Thelephora versatilis and Thelephora pseudoversatilis: two new cryptic species with polymorphic basidiomes inhabiting tropical deciduous and sub-perennial forests of the Mexican Pacific coast. Mycologia 107: 346-358. https://doi.org/10.3852/14-151

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